4d5b19301e8beee5aaf55d66fd1b7e6a *DESCRIPTION
6335cf321e38521044b9ace2c0da5e40 *NAMESPACE
dc408bbd88bba72bc48353d809ad950f *R/get_edge.R
34804fab39b1eb57dd045f2100a7a28b *R/plot.pplace.R
6fa88720c31aceb35be5e37049bc2924 *R/pplace_to_matrix.R
877a10144e2bf7962aff94a0809e6b7a *R/pplace_to_table.R
3a5e0b487013bb9123f988fd99eef097 *R/pplace_to_taxonomy.R
3a97e22ae0aa5dc3a9adda6851a2ed94 *R/print.jplace.R
36555c9bee11075c7567d062ca03e5ee *R/print.pdb.R
c2c0a46120d2571aa760491c13f14eeb *R/print.pplace.R
ef3dc5a7066f18f81df55d2609ebf7fd *R/read_jplace.R
e660a73fe3f40257c2d774f7bcd0f481 *R/read_pdb.R
994bab57d4bae10ba6c1ff89cfbbc04f *R/read_sqlite.R
bf59da7bba1cecbc1341adb40365fe65 *R/refpkg.R
1a0c4e0d996d5d4202cd6052412908df *R/sub_pplace.R
7b9f455cbee1e2ff80c9b6be0464eafe *R/write_jplace.R
ff3f8454765891a6b1bb7a79572155ab *build/partial.rdb
b2e88231f8cedbc95bf40d82c501b1fd *build/vignette.rds
2940c854a6973292cec6d59ef862d9d6 *data/pplace.rda
4188053f9cbfdaf9ebdea0a15c060e04 *inst/doc/bossa-analysis.R
211c4947ffc8d97ca4ac34cba80415e0 *inst/doc/bossa-analysis.Rmd
00a2a0ccbf6099f7c6b5bb3541658047 *inst/doc/bossa-analysis.html
50af9a0f3cb381feb511ad6c6fecc942 *inst/doc/bossa-refpkg.R
ff243c80d1ee65470245e1096be0983a *inst/doc/bossa-refpkg.Rmd
bf31d6484bbd6e273f1b8b48c42374a9 *inst/doc/bossa-refpkg.html
1ad3ba7f636ee9637863934852e73f0f *inst/extdata/1L2M.pdb
51434ae00a391e0dd09491e905a84b5a *inst/extdata/example.jplace
27ec70f7f4cd9769ad0beb627b933073 *inst/extdata/example.refpkg/CONTENTS.json
c4bf3ff828ae750f586405e9398cd204 *inst/extdata/example.refpkg/RAxML_result.bv_refs_aln
a37f8688ef7521de97a8b99f409da232 *inst/extdata/example.refpkg/bv_refdata.csv
e2eb55294651fcac5f05d1541bfd4e17 *inst/extdata/example.refpkg/tax_table.csv
edad2657c1dc294df41355f836bf8a72 *inst/extdata/example.sqlite
d0d5e3a13b6beb83e0be984fd65b348e *inst/extdata/polerovirus.refpkg/CONTENTS.json
0f509a99f1bd2ca5c245a4a3290f4847 *inst/extdata/polerovirus.refpkg/polerovirus_ROOTED.tre
aaece50c671f2d34cab7116b86d28af1 *inst/extdata/polerovirus.refpkg/polerovirus_info.csv
307a074ec3d1427a5dcddf4b61db0000 *inst/extdata/polerovirus.refpkg/polerovirus_taxonomy.csv
1f4b508654d8291005d24e98a33c1db7 *inst/extdata/polerovirus_from_genbank_MAFFT.tre
307a074ec3d1427a5dcddf4b61db0000 *inst/extdata/polerovirus_taxonomy.csv
7c986da4505cc9cd7cb375ed4740af6a *man/BoSSA-package.Rd
b606d70b0254cc63192f5a57c39c73d6 *man/plot.pplace.Rd
e548a0893e2e6a61a05f0b4cab9c81a7 *man/pplace.Rd
cfbfe14722972eaa9f790dea2fdf1921 *man/pplace_to_matrix.Rd
2a20cb44c1ea94b0d76d4c6f14e7ef70 *man/pplace_to_table.Rd
cd28a9df14b0933f6ecef2af2574ba67 *man/pplace_to_taxonomy.Rd
68e118283f33db4c8f98e299a6c65c1a *man/print.pdb.Rd
ae82e62b42a132204eb782fe55f4e1a2 *man/print.pplace.Rd
4c1c7c22e801494a9bc74a8c8593e9b7 *man/read_jplace.Rd
c25c66dc309e1b92c2abea10d65e572f *man/read_pdb.Rd
95054bccb088e557d9a699d258e87b66 *man/read_sqlite.Rd
d5514332e34783456b048015b848f6bf *man/refpkg.Rd
6d1661feb06a82e71780926b9f9659f2 *man/sub_pplace.Rd
143134b13d02ae387c055557b9d4dc45 *man/write_jplace.Rd
211c4947ffc8d97ca4ac34cba80415e0 *vignettes/bossa-analysis.Rmd
ff243c80d1ee65470245e1096be0983a *vignettes/bossa-refpkg.Rmd
