export(mts_omics)
export(mts_mixModelCluster)
export(mts_mixModelCluster_XPR)
export(mts_crisprPartition)
export(mts_Crispr)
export(mts_CrisprTS)
export(mts_InducedDependency)
export(mts_Mutation)
export(mts_targetCoverageFromMutations)
export(mts_tests)
export(mts_clusterAvg)
export(mts_patternDetection)
export(mts_pairwiseExpressionPlot)
export(mts_plotCRISPRGeneCluster)
export(mts_plotMutation)
export(mts_formatMatrix)
export(mts_GeneDepID)
export(mts_GeneDepCrispr)
export(mts_GeneDepMutation)
export(mts_genepairsChunkGeneration)
export(mts_plotClusterDistribution)
importFrom("graphics", "plot.new")
importFrom("grDevices", "dev.off", "hcl", "png", "pdf")
importFrom("graphics", "abline", "par")
importFrom("stats", "chisq.test", "dnorm", "kmeans", "na.omit", "filter",
             "p.adjust", "sd", "t.test", "ppois", "qnorm", "binom.test", "setNames")
importFrom("utils", "data", "combn")
importFrom("reshape2", "melt", "dcast")
importFrom("ggplot2", "position_jitter", "scale_color_manual", "aes", "labs", "element_blank", "element_rect",
	   "element_text", "geom_boxplot", "theme", "ggplot", "ggtitle", "ggsave", "geom_density", "geom_point", 
           "geom_bar", "ggplotGrob", "guides", "geom_vline", "geom_hline", "coord_flip", "scale_y_reverse", "theme_minimal", "scale_fill_identity", "coord_cartesian",
	   "scale_x_continuous", "scale_fill_manual")
importFrom("gtools", "quantcut")
importFrom("pracma", "repmat")
importFrom("grid", "unit")
importFrom("pbmcapply", "pbmclapply")
importFrom("pbapply", "pblapply")
importFrom("utils", "head", "globalVariables")
importFrom("testthat", "test_that", "expect_length", "expect_output", "expect_true", "expect_named", "expect_error", "expect_type", "expect_condition", "expect_warning", "expect_equal", "expect_null", "expect_s3_class", "expect_visible", "expect_no_error", "skip_on_cran")
importFrom("igraph", "graph_from_data_frame", "neighbors", "as_ids", "V")
importFrom("patchwork", "plot_layout", "plot_spacer")
importFrom("ggplot2", "element_line", "guide_legend")



